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What is Gscope ?

 New : Gscope knows a lot about GeneNames

Gscope is an integrated platform allowing the analysis of all kind of genomic data.

Gscope is written in Tcl/Tk and runs on all systems.

Gscope is specially designed to perform high throughput analysis.

Gscope is mainly composed of

  • all tools necessary to create the basic data
  • analysis tools
  • visualisation interface

it allows also

  • the creation and feeding of SQL relational databases
  • the quering and display of the available information through a web based interface


Gscope works on a Gscope Project

A gscope Project can be a complete genome, a set of proteins, a set of genes, etc.

To run Gscope you need to define the corresponding project.

 setgscoperr MyProject

If the project already exists the Gscope Environment Variables are setted.

If it concerns a new project the directories are created and th evariables are setted. (see New Gscope Project)

Gscope has some specific applications

How it works